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GSTN Advisory Jan 2026: Interest Calculation Changes & Key Enhancements in GSTR-3B

๐Ÿ“Œ Background of the Advisory

The Goods and Services Tax Network (GSTN) has issued an advisory titled โ€œAdvisory on Interest Collection and Related Enhancements in GSTR-3Bโ€, informing taxpayers about important changes implemented on the GST portal from January-2026 onwards.

These changes primarily aim to:

  • Align interest computation with statutory provisions

  • Improve accuracy in tax liability reporting

  • Reduce manual disputes related to interest calculation

  • Ensure proper recovery of interest in case of delayed compliance


๐Ÿงฎ 1. Updated Interest Computation in GSTR-3B (Table 5.1)

๐Ÿ”น What Has Changed?

From January-2026 tax period onwards, the GST portal now computes interest in Table 5.1 of GSTR-3B by giving benefit of the minimum cash balance available in the Electronic Cash Ledger (ECL) from:

Due date of return filing โ†’ Date of tax payment (offset)

This enhancement is strictly in line with the proviso to Rule 88B(1) of the CGST Rules, 2017, read with Section 50 of the CGST Act, 2017.


๐Ÿ”ข Revised Interest Computation Formula

Interest =
(Net Tax Liability โ€“ Minimum Cash Balance in ECL from due date to date of debit)
ร— (No. of days delayed รท 365)
ร— Applicable interest rate


โš ๏ธ Important Compliance Notes

  • Interest auto-populated in Table 5.1 is non-editable downward

  • Taxpayer cannot reduce the system-calculated interest

  • Auto-computed interest is minimum payable interest

  • Taxpayers must self-assess and increase interest manually, if required

This significantly reduces disputes on interest calculation while preserving taxpayer responsibility.


๐Ÿ“Š 2. Auto-Population of Tax Liability Break-Up Table in GSTR-3B

From January-2026 onwards, the Tax Liability Break-Up Table in GSTR-3B will be system-generated, based on:

  • Date of documents reported in GSTR-1 / GSTR-1A / IFF

  • Supplies pertaining to previous tax periods

  • Tax liability discharged in current GSTR-3B

This helps in clear segregation of:

  • Current-period supplies

  • Past-period supplies reported late but paid now

๐Ÿ“ Path on Portal:
Login โ†’ GSTR-3B Dashboard โ†’ Table 6.1 โ†’ Tax Liability Breakup


๐Ÿ” 3. Update in Table 6.1 โ€“ Suggestive Cross-Utilisation of ITC

A major facilitation measure has been introduced regarding ITC utilisation.

๐Ÿ”น New System Behaviour

Once IGST ITC is fully exhausted, the GST portal will allow:

  • Payment of IGST liability using CGST & SGST ITC

  • Any sequence of utilisation permitted by the system

This change enhances flexibility while remaining within the framework of Section 49 of the CGST Act.


๐Ÿ“„ 4. Interest Collection Through GSTR-10 (Final Return)

For cancelled registrations, a critical clarification has been issued:

If the last applicable GSTR-3B is filed after the due date,
interest on such delayed filing shall be levied and collected through GSTR-10 (Final Return).

This ensures that:

  • Interest does not escape recovery merely due to cancellation

  • Final compliance is completed before legal closure


โš–๏ธ Legal Alignment & Statutory References

The advisory is aligned with:

  • Section 50, CGST Act, 2017 โ€“ Interest on delayed payment

  • Rule 88B, CGST Rules, 2017 โ€“ Manner of interest calculation

  • Section 49, CGST Act โ€“ Payment & ITC utilisation

  • Section 39 & 45, CGST Act โ€“ Return filing obligations

  • GSTR-3B & GSTR-10 statutory framework



๐Ÿงญ Professional Insight โ€“ Practical Impact

โ€œThe revised interest logic finally brings the GST portal in line with Rule 88B, preventing unjust interest on funds already lying in the cash ledger. However, taxpayers must remain vigilant โ€” the system computes minimum interest, not necessarily the correct interest.โ€
โ€” Tech-Tax Solutions


๐Ÿ Conclusion

The January-2026 enhancements represent a significant maturity step in GST compliance architecture. Automated interest computation, smarter liability break-up, flexible ITC utilisation, and structured recovery through GSTR-10 collectively reduce ambiguity while increasing compliance discipline.

Taxpayers should re-evaluate their delayed filing strategy, cash-ledger management, and self-assessment processes in light of these changes.

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